P-value color scale
> 10-3 10-3 to 10-5 10-5 to 10-7 10-7 to 10-9 < 10-9

 

GO Term Description P-value Enrichment (N, B, n, b) Genes
GO:0005581 collagen 4.29E-10 190.78 (17361,35,13,5) [+] Show genes
GO:0044420 extracellular matrix part 2.08E-9 72.19 (17361,111,13,6) [+] Show genes
GO:0030935 sheet-forming collagen 5.25E-8 572.34 (17361,7,13,3) [+] Show genes
GO:0005583 fibrillar collagen 2.55E-6 1,578.27 (17361,11,2,2) [+] Show genes
GO:0044421 extracellular region part 5.5E-6 9.39 (17361,986,15,8) [+] Show genes
GO:0031012 extracellular matrix 1.26E-5 22.04 (17361,303,13,5) [+] Show genes
GO:0005587 collagen type IV 1.62E-5 643.00 (17361,6,9,2) [+] Show genes
GO:0005576 extracellular region 7.99E-5 5.02 (17361,1820,19,10) [+] Show genes
GO:0005592 collagen type XI 2.28E-4 8,680.50 (17361,2,1,1) [+] Show genes
GO:0005584 collagen type I 3.44E-4 4,340.25 (17361,2,2,1) [+] Show genes
GO:0005591 collagen type VIII 7.49E-4 1,335.46 (17361,1,13,1) [+] Show genes
GO:0005598 short-chain collagen 7.49E-4 1,335.46 (17361,1,13,1) [+] Show genes
GO:0002102 podosome 8.06E-4 80.37 (17361,6,72,2) [+] Show genes

Species used: Homo sapiens

The system has recognized 34053 genes out of 34082 gene terms entered by the user.
34053 genes were recognized by gene symbol and 0 genes by other gene IDs .
12576 duplicate genes were removed (keeping the highest ranking instance of each gene) leaving a total of 21477 genes
Only 17361 of these genes are associated with a GO term

The GOrilla database is periodically updated using the GO database and other sources.
The GOrilla database was last updated on Jul 3, 2010

This results page will be available on this site for one month from now (until Aug 5, 2010 ). You can bookmark this page and come back to it later.


'P-value' is the enrichment p-value computed according to the mHG or HG model. This p-value is not corrected for multiple testing of 1079 GO terms.

Enrichment (N, B, n, b) is defined as follows:
N - is the total number of genes
B - is the total number of genes associated with a specific GO term ('target' set and 'background set')
n - is the number of genes in the 'target set'
b - is the number of genes in the 'target set' associated with a specific GO term
Enrichment = (b/n) / (B/N)

Genes: For each GO term you can see the list of associated genes that appear in the 'target set'.
Each gene name is specified by gene symbol used in GO database followed by a short description of the gene